CDS

Accession Number TCMCG016C02971
gbkey CDS
Protein Id OMP00889.1
Location complement(join(7418..7438,7894..8275,8500..8627,8701..8748,9056..9152,9614..9675,9774..9789,9888..9952,10073..10091,10175..10234,10940..11124))
Organism Corchorus capsularis
locus_tag CCACVL1_03263

Protein

Length 360aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01006572.1
Definition Transcription factor, MADS-box [Corchorus capsularis]
Locus_tag CCACVL1_03263

EGGNOG-MAPPER Annotation

COG_category K
Description MADS-box protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K04454        [VIEW IN KEGG]
ko:K09260        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04010        [VIEW IN KEGG]
ko04013        [VIEW IN KEGG]
ko04022        [VIEW IN KEGG]
ko04371        [VIEW IN KEGG]
ko04921        [VIEW IN KEGG]
ko05202        [VIEW IN KEGG]
ko05418        [VIEW IN KEGG]
map04010        [VIEW IN KEGG]
map04013        [VIEW IN KEGG]
map04022        [VIEW IN KEGG]
map04371        [VIEW IN KEGG]
map04921        [VIEW IN KEGG]
map05202        [VIEW IN KEGG]
map05418        [VIEW IN KEGG]
GOs GO:0001558        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0010152        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010769        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0022604        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043900        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048638        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051510        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060284        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080092        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAAGGGTTAAACTAAAAATTAAAAGGTTAGAGAGCACTAGCAACAGGCAAGTTACATATTCGAAACGAAGAACTGGAATTTTGAAGAAAGCTAAGGAATTATCAATACTATGTGACATTGAGATTATCCTTCTCATGTTTTCTCCGACTGGAAGGCCTACATTATTCAATGGAGAGCGCAGCACTATTGAAGAGGTTATTGCTAAGTTTGCACAATTAACACCACAAGAAAGGGCGAAAAGGAAGCTGGAAAGCCTTGAAGCACTGAAGAAAACGTTCAAGAAGTTGGATCATGATGTAAATATACAGGACTTTATAGGTGCAAACAGTCAATCTGTTGAGGAAATGACTAATGAAGTATCAATGTTGCAAGCTCAGCTTACTGAAGTACATAAGAGACTGAGCTACTGGACTAATCCGGATAAAATTGACAACATAGAACATCTCAGGCAGATGGAAGATTCACTAAGAGAATCCATTGAGCGTATCCGGATACACAAGGAAAATTTTGGAAAACACCATCTTATGTCGCTAGAATGCACTAGCCAGTTTCAGAACGGGATACCTTTGCCTATGATGATTGGTGGGGTGCAAGAAGCTCAGCCTGTTGCATGGCTTCCAAACAATGACAATCAACACATGTTATTGCATAATGAACCAAACTTTTTACCTCATCGAGATACAGAGTGTTCTGCAGATGGTTCTCTAGCAAGCTATTCTGGTTTCTTCAGCTCTGGTAAACAAACAGAGATTGGGAGTTCAGGACAAGTTGATAATGTGGTACAGGAGAGCAATGCCCTGAATGATTTAGGGAGTACTGCATGCTTAAGCTTACAACATGGTGATCAATATCTGTACCCACCGTATAGTGCTTCAAATTTGCAAGATGTGAAGTTGGAGTCAGAGATGGAGGTCAACTTGCAAGGAAATCCTGCGGTATACCAAGTTATTAGCAACTTTGAAATCCCTAGACCTATGTATAATGGTGGGCATCAAGCTTGGGTACCTTCTTCTGGCCCCTGTGGTATTGCGATGTTTGATGGGAGTTCTTACAATCAGGCTATTGTGGATATAAGATGA
Protein:  
MGRVKLKIKRLESTSNRQVTYSKRRTGILKKAKELSILCDIEIILLMFSPTGRPTLFNGERSTIEEVIAKFAQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFIGANSQSVEEMTNEVSMLQAQLTEVHKRLSYWTNPDKIDNIEHLRQMEDSLRESIERIRIHKENFGKHHLMSLECTSQFQNGIPLPMMIGGVQEAQPVAWLPNNDNQHMLLHNEPNFLPHRDTECSADGSLASYSGFFSSGKQTEIGSSGQVDNVVQESNALNDLGSTACLSLQHGDQYLYPPYSASNLQDVKLESEMEVNLQGNPAVYQVISNFEIPRPMYNGGHQAWVPSSGPCGIAMFDGSSYNQAIVDIR